.get

The proteopy.get module provides functions to extract analysis results from AnnData objects as pandas DataFrames for further processing or export.

Functions

proteopy.get.proteoforms_df	Return proteoform peptide assignment results as a tidy dataframe.
proteopy.get.differential_abundance_df	Retrieve differential abundance results from .varm as a long-format DataFrame.
proteopy.get.tests	Retrieve a summary of all differential abundance tests stored in .varm.