.utils

The proteopy.utils module provides utility functions for data validation and common operations.

Warning

Functions in this module are under constant development and backwards compatibility is not guaranteed.

Data Validation

proteopy.utils.is_proteodata	Check whether the AnnData object stores peptide- or protein-level proteomics data.
proteopy.utils.check_proteodata	Validate that adata satisfies ProteoPy assumptions, raising on failure.

Array Utilities

proteopy.utils.is_log_transformed

Heuristic detector for log-transformed matrices.